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My scientific specialty is chronobiology (circadian rhythms and photoperiodism), with additional interests in comparative physiology, animal behavior and evolution. I am not an MD so I cannot diagnose and treat your sleep problems. As well as writing this blog, I am also the Online Discussion Expert for PLoS. This is a personal blog and opinions within it in no way reflect the policies of PLoS. You can contact me at: Coturnix@gmail.com


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« Sexual Activity Reported In Dreams Of Men And Women | Main | Nurses...In...Space!!! »

Timing of duration of protein activity - a molecular clock or timer?

Category: Clock News
Posted on: June 14, 2007 10:23 PM, by Coturnix

This article, of course, got my attention:

Clocking In And Out Of Gene Expression

Using steroid receptor coactivator-3 (SRC-3), they demonstrated that activation requires addition of a phosphate molecule to the protein at one spot and addition of an ubiquitin molecule at another point. Each time the message of the gene is transcribed into a protein, another ubiquitin molecule is chained on. Five ubiquitins in the chain and the protein is automatically destroyed.

"It's built-in self destruction," said O'Malley. "It prevents you from activating a potent factor in the cells that just keeps the clock running and the gene continuing to be expressed." In that scenario, the result could be cancer, too much growth or an abnormal function.

"It means there's a fixed length of time that the molecule can work. When it's activated, it's already preprogrammed to be destroyed. The clock's running and each time an ubiquitin is added, it is another tick of the clock."

So, it is a five-step 'hourglass' timer of sorts, which I would not, for he fear of confusion, imprecisely call a 'clock'. A clock ends a cycle at the same state at which it begins, so the cycle can spontaneously repeat. An hourglass timer has a beginning and an end, and does not spontaneously restart the cycle.

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