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Discovering Biology in a Digital World

My thoughts on biology, teaching, life, and exploring the living world via the digital one. Only my opinions are represented by these postings, they do not represent the viewpoints of any funding agency or Geospiza, Inc.

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Sandra Porter I am a microbiologist and molecular biologist turned tenured biotech faculty turned bioinformatics scientist turned entrepreneur. My passion is developing instructional materials for 21st century biology (Geospiza Education).

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    October 26, 2006

    Your doggie on drugs

    Category: Humor

    Is your precious pup spending an unusual amount of time time hanging around by the pond? Is poochy looking a little green around the gills? Does fido seem a little feeble? My friend you've got trouble. Trouble with a capital "T". What's the canine equivalent to catnip?...

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    October 18, 2006

    Ethical issues in biotechnology: contrasting companies and classrooms

    Category: Classic Digital Bio

    What ethical issues concern people working in biotech?

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    October 16, 2006

    Speak out for the Tripoli Six, before it's too late

    Category: Announcements

    Time is running out in Tripoli for six nurses and one doctor, under sentence of death.

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    October 15, 2006

    Mendel's Garden #8: Harvest Edition

    Category: Genetics & Molecular Biology

    Welcome to the October 15, 2006 edition of Mendel's Garden. Join me as we walk through the fields and admire the harvest....

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    October 13, 2006

    Dihydrogen Monoxide: Controversial Solvent Exposed

    Category: Humor

    Yikes, I've spilled some DHMO on my hands! What do I do now? Do you know the truth about DHMO? Look at this web site and tell me if you still want to go swimming....

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    Digital Biology Friday: Searching for synonyms

    Category: Digital Biology Fridays

    In last week's episode, your assignment was to think of an interesting plant trait and find a description about a gene, related to that trait, by searching PubMed....

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    October 11, 2006

    Will the real jellyfish please stand up?

    Category: Science education

    Is seeing believing or seeing deceiving?

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    A day at the Biotech Expo

    Category: Classic Digital Bio

    No one in a life science-related industry or research lab, in Western Washington, is safe at this time of year. Surely, you're joking! No, seriously, there are teachers and science enthusiasts everywhere looking to sign you up! And don't call me "Shirley." Sign me up? That's right, it's time to prepare for the...

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    October 10, 2006

    Head, Shoulders, Knees, and Toes

    Category: Classic Digital Bio

    Why is an eye, an eye and a nose, a nose? Why do different cells create different kinds of tissues when all the cells in a single organism start out with the same set of instructions (aka DNA)?...

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    October 9, 2006

    Time to Submit: Mendel's Garden Blooms Here on Sunday

    Category: Announcements

    Mendel's garden in Bruno, CZ, may be too far for physical travel, but you can still imagine what Mendel might have thought if he'd gotten a look at this version of his vision. Maybe I'm taking alliteration a little too far, but that doesn't mean that you have to show any restraint. All you have to do is submit to...

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    Doing your lessons in blood

    Category: Science education

    typing that is.

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    What's it really like on the "dark side?"

    Category: Science culture

    To some inhabitants of the ivory tower, industry looks like paradise.

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    October 7, 2006

    While students do forensics, I dissect the class

    Category: Science education

    The blood typing lab, part I. What went wrong? and why? Blood typing part II. Can this laboratory be saved? Those wacky non-major Zoo students are at it again! And this time they drew blood! Mike's undergraduate students learned about blood typing, a common tool of detectives and real crime TV. They did the classic blood typing lab, and by...

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    October 6, 2006

    Teaching science, scientifically

    Category: Science education

    Why not use a scientific approach to teaching?

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    Digital Biology Friday: Finding genes with PubMed

    Category: Digital Biology Fridays

    Many of you might take this for granted, and I know it seems amazing today, but I when first started teaching, our access to scientific literature was pretty limited. I could go to the UW and use Grateful Med to search Medline, but we didn't have anything like it at my college and web browsers, like Mosaic, had yet to...

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    October 5, 2006

    Which women should win?

    Category: women in science

    Which women do you think should win the Nobel Prize?

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    Is the truth in Duluth?

    Category: Humor

    Viking ships and runestones. It must be seen to be believed.

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    October 4, 2006

    Leif Erickson vs. Columbus

    Category: Miscellany

    This may seem strange to anyone who hasn't lived in Minnesota, but when I was a child, kids in my elementary school used to have fist fights when it came to the question of which famous European discovered America....

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    Plants that make crystals that look like plants

    Category: Classic Digital Bio

    It's a crystalline botanical fashion show.

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    October 3, 2006

    Sexism in science and finding our way across the fault lines

    Category: Science culture

    Some of my fellow ScienceBloggers have been hotly debating the role of male science faculty in perpetuating a climate that's chilly and hostile to women. From one end of the ring, we've heard the classic complaint "It's not my fault, I didn't do it." From the other end, we hear: "It is your fault because you're not doing anything to...

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    October 1, 2006

    Bio::Blogs 4

    Category: Bioinformatics

    Welcome to the fourth edition of Bio::Blogs! This is the carnival where we explore topics at the intersection of computing, biology, and sometimes a bit human behavior. In this edition, we consider issues with annotation, agonize over standards, explore the question of whether or not it's possible to tame those wild and wooly computational biologists and make them laugh their...

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