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Discovering Biology in a Digital World

My thoughts on biology, teaching, life, and exploring the living world via the digital one. Only my opinions are represented by these postings, they do not represent the viewpoints of any funding agency or Geospiza, Inc.

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Sandra Porter I am a microbiologist and molecular biologist turned tenured biotech faculty turned bioinformatics scientist turned entrepreneur. My passion is developing instructional materials for 21st century biology (Digital World Biology).

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Digital World Biology

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March 31, 2008

Whatever happened to Bill Nye the Science Guy?

Category: Humor

We used to love watching him blow stuff up on TV. But things are different now.... GrrlScientist has the movie....

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March 29, 2008

What do computer scientists do anway? Inquiring minds want to know.

Category: Science education

Our new Scibling, Jane, is a real life computer scientist. If you've ever wondered what computer scientists really do during the day, Jane will set you straight (I guess they're...

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March 28, 2008

It's bad enough to throw your data away

Category: Microbiology

If you're old enough or you've taken microbiology, there's a chance that sometime in your life you heard of Legionaire's disease. This disease was caused a bacteria that inhabited the...

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March 27, 2008

A beginner's guide to making a phylogenetic tree

Category: phylogeny

I made this video (below the fold) to illustrate the steps involved in making a phylogenetic tree. The basic steps are to: Build a data set Align the sequences Make...

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March 20, 2008

Oh internet gurus, what's your advice?

Category: Computers and software

Believe it or not, there is the remote possibility that I may get to have some influence in getting a web application built, that I can use in teaching, that...

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March 19, 2008

How to use Cn3D

Category: molecular structures

A video tutorial on molecular structures.

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Hey instructors, do you know what kinds of operating systems your students use?

Category: Science education

It's not Linux.

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March 17, 2008

Starting a new biotech program? Teaching a biotech course?

Category: Science education

Bio-Link is accepting applications for this year's National Summer Fellows forum, June 2-6th, in Berkeley, CA. You can get an application at www.bio-link.org I'll be there, doing some kind of...

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DNA sequencing errors hit home

Category: Bioinformatics

One of my colleagues has a two part series on FinchTalk (starting today) that discusses uncertainty in measurement and what that uncertainty means for the present and Next Generation DNA...

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March 16, 2008

Wonderful pictures of Gas Works park

Category: Science Art

Things move off of our entry page pretty quick sometimes. If you missed this post from Bioephemera, go take a look. She has great pictures and a fascinating story about...

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