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Next Generation DNA Sequencing does more than sequence DNA
Category: sequence analysis
Listening to the cellular orchestra with Next Generation DNA sequencing.
Posted by Sandra Porter at 6:24 PM • 1 Comments •
Discovering Biology in a Digital World
My thoughts on biology, teaching, life, and exploring the living world via the digital one. Only my opinions are represented by these postings, they do not represent the viewpoints of any funding agency or Geospiza, Inc.
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I am a microbiologist and molecular biologist turned tenured biotech faculty turned bioinformatics scientist turned entrepreneur. My passion is developing instructional materials for 21st century biology (Digital World Biology).
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Genetics & Molecular Biology:
BLASTing through the flu: activity 5, how similar is similar?
Category: Influenza resources
How similar are the 2009 H1N1 flu sequences to each other?
Posted by Sandra Porter at 4:23 PM • 9 Comments •
Open science, peer review and the flu
Category: Bioinformatics
Doing science as a community
Posted by Sandra Porter at 10:00 PM • 4 Comments •
More flu follies: comparing sequences and making trees, activity 4
Category: Bioinformatics
Did the swine flu virus come from Ohio? Insights from flu phylogenetic trees.
Posted by Sandra Porter at 11:21 AM • 3 Comments •
Did the California H1N1 swine flu come from Ohio?
Category: Bioinformatics
It looks like the California flu strains may have come from Ohio
Posted by Sandra Porter at 10:01 PM • 61 Comments •
Finding influenza: the data are out there, let's get them, activity 3
Category: Bioinformatics
Influenza genome sequences from California and Texas are at the NCBI.
Posted by Sandra Porter at 6:16 PM • 0 Comments •
Further fun with the flu: digital biology activity 2
Category: Bioinformatics
What kinds of flu do the animals get?
Posted by Sandra Porter at 12:38 PM • 0 Comments •
Having fun with the flu: digital biology activity I
Category: Bioinformatics
Learn about the flu by exploring the data
Posted by Sandra Porter at 11:09 AM • 2 Comments •
The cost of DNA sequencing revisited
Category: Bioinformatics
Genomes are getting cheaper, how long will Sanger sequencing be around?
Posted by Sandra Porter at 1:45 PM • 5 Comments •
Using protein blast and searching for Elvis, part I.
Category: Bioinformatics
How old do you have to be to see Elvis in a Las Vegas club? Believe or not, blastp can tell you the answer.
Posted by Sandra Porter at 8:27 PM • 8 Comments •
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