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Grumpy John Wilkins is an aged, eternal student, who thinks philosophy of biology is at least as interesting as politics or sport and twice as important. He has a PhD from the University of Melbourne and a position as a Postdoctoral Fellow Sessional Lecturer at the University of Queensland, in Australia. After a varied career, involving factories, gardening, civil service, publishing, graphics, public relations but not, unfortunately for the CV, driving a truck, John finally completed his thesis on species concepts in 2004, which he has worked into two books. Species Definitions: A Sourcebook (Peter Lang) will come out in 2008; Species: A History of an Idea (University of California Press) will appear, it is hoped, in early 2009. He is also interested in cultural evolution, philosophy of religion, Macintosh computers and his kids.

If anyone knows of a tenurable, or even medium term, job in philosophy of biology, let me know. Have library, will travel. The contract ran out ...

This blog is designed to host any random thoughts that happen to be passing through my forebrain at a given moment. So there will be errors...

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« Demarcating science | Main | PLOS Open Access blog started »

The reciprocal illumination of paleontology and molecular systematics

Category: Species and systematics
Posted on: June 12, 2006 6:00 AM, by John S. Wilkins

An archival post from a year and a half ago.

I recently attended my last Systematics Forum at the Melbourne Museum. This lovely little series covers issues at a technical and theoretical level to do with classification in biology, which is my obsession du jour.

The forum was a special one, a talk by Michael S. Y. Lee (aka Mike) of the South Australia Museum, and the University of Adelaide, entitled Whale teeth, bird hands and snake legs: why palaeontologists need to talk to molecular biologists (and vice versa).

Mike is one of those way too handsome and way too young types who seems to have a handle on everything (despite his advocacy of the Phylocode, for which I forgive him, although Gary Nelson may not). This was an especially interesting talk.

Mike used three examples of a correction of paleontology by molecular systematics and vice versa to show that both disciplines need each other. The first example is the "whippo" hypothesis - that the closest living relatives of whales are hippos and not some other Artiodactyl, such as the Mesonychids:


Source: Philip Gingerich

Some of the other examples were the origins of snakes and their relationship to "aquatic goannas", and the evolution of avian wings.

These cases depend traditionally on the use of morphological data. In the case of the whales, the phylogeny relied upon teeth, which were extremely similar to mesonychid teeth. This led researcher to think that whales evolved from these carnivorous animals. But with Gingerich's discovery of whale ancestral astralugus bones (see the diagram) in the ankle, it became clear that they were more closely related to the herbivorous animals of which hippos are a member taxon.

Molecular data removed all doubt. Whales are in fact more closely related to hippos than to mesonychids, and the similarity in teeth is a convergently evolved feature.

It is often the case that teeth are used as the criteria for classification, as they are persistent features of organisms, and indicate a lot of information about the ecology of the animals. A famous case is, of course, the evolution of horses (pics here), where the shift from browsers of tree leaves to grazers of grass-eaters not only marked the shift of an ecological feature (that is, the evolution of silaceous grasses) but also the evolution - once - of a feature which thereafter was common to all horses that persisted.

The trouble is that convergence can hide or confuse the phylogenetic signal. Teeth are only informative if they happen to match the evolutionary tree - in the case of cetaceans and mesonychids, they didn't. Once that character was removed, said Mike, the rest of the morphological data made sense and matched the molecular data.

The founder of what he called "phylogenetic systematics", which has become known as "cladism", Willi Hennig, wrote at length in his epoch-making book Phylogenetic systematics of the need for the various disciplines in biology to "reciprocally illuminate" each other when the evolutionary past was being uncovered. This is a beautiful case of exactly that.

We don't approach our classifications of the world nakedly, so to speak. We are always clothed in prior knowledge - well, we have to be, really, as we wouldn't even know what to look at otherwise. Thus do we evolve better knowledge of things...

Hennig, Willi. 1966. Phylogenetic systematics. Translated by D. D. Davis and R. Zangerl. Urbana: University of Illinois Press.

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Comments

#1

Stephen Jay Gould said that paleontologists need to know more biology. Rudolf Raff has said that biologists need to know more paleontology. Glad to see that people agree.

Posted by: John Wendt | June 12, 2006 7:22 PM

#2

The turf wars between disciplines of science as as much fun for a philosopher as theory-wars...

Posted by: John Wilkins | June 12, 2006 9:29 PM

#3

You just like watching the blood flow, don't you?

Bob

Posted by: Bob O'H [TypeKey Profile Page] | June 13, 2006 2:34 AM

#4

Hey, it's cheaper than hockey....

Posted by: John Wilkins | June 13, 2006 4:59 AM

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