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Evolving Thoughts

One man's struggle against impermanence

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Grumpy John Wilkins is an aged, eternal student, who thinks philosophy of biology is at least as interesting as politics or sport and twice as important. He has a PhD from the University of Melbourne and a position as a Postdoctoral Fellow at the University of Queensland, in Australia. After a varied career, involving factories, gardening, civil service, publishing, graphics, public relations but not, unfortunately for the CV, driving a truck, John finally completed his thesis on species concepts, which he is working into two books. One has been accepted for publication, and will come out in 2008; the other may be contracted soon. He is also interested in cultural evolution, philosophy of religion, Macintosh computers and his kids (they sort of make it a necessity, you know?).

If anyone knows of a tenurable, or even medium term, job in philosophy of biology, let me know. Have library, will travel. The contract runs out soon...

This blog is designed to host any random thoughts that happen to be passing through my forebrain at a given moment. So there will be errors...

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Philosophy of Science:

What sorts of people

In Shakespeare's The Tempest, Act V scene 1, Miranda says O, wonder! How many goodly creatures are there here! How beauteous mankind is! O brave new world, That has such people in't! The third line gave Aldous Huxley the...

Short takes

So much has been happening in the world while I was giving a talk on the adaptiveness of religion in Sydney. The Platypus thing was one item I'd have blogged on if the rest of the blogosphere hadn't beaten...

Podblack Cat

... is a blogger on the paranormal and skeptical stuff. She has some nice posts on Women and superstition (parts one and two) and Skeptical Books for Children (parts one, two, three and four). Go check them and her...

Religion and imagination

In a piece reported on in New Scientist, Maurice Bloch has proposed another basis for religion: imagination. Because we can project ourselves and imagine the "transcendental" relation in social and personal relationships, we can imagine that there are agents...

Barcoding and classification, again

Duck and cover, folks. I'm about to upset somebody. I have previously been fairly critical of DNA barcoding, the proposal to use a small fragment of the COI gene - a mitochondrial gene cytochrome c oxidase, subunit I -...

Another claim for priority from New Zealand

One of the enduring patterns of the history of the history of evolution is for historians to claim that their favourite individual, or their country's best and brightest, invented evolution. The most recent appears to be this guy from...

The greatest threat: antimodernism

In the thread on the recent debate between Winston and Dennett, I said that I thought the greatest threat to scientific progress and rationality was antimodernism, which was not always religious. Here, I'm going to elaborate on that cryptic...

Resolved: religion is the greatest threat to scientific progress and rationality that we face today

The Nays won, narrowly, and the debate, between Daniel Dennett and Lord Robert Winston, will be available as a podcast here. A summary is here. One thing that I find interesting in these debates, which let's face it are...

Sociology and science

I have an uncanny ability to offend those who I shouldn't be offending, with bad jokes. In a recent post I put in a Tom Lehrer video where he mocks sociology. Having had philosophy mocked by my friends and...

Lehrer on sociology

I am not being discipline-centric, no, not at all. This one's for Eli Gerson......

On ID and the public awareness of evolution

Imagine a scientific theory that very few people know or understand. Let's call it "valency theory". Now suppose someone objects to valency theory because it undercuts their view of a particular religious doctrine, such as transubstantiation. So they gather...

Sarkar slams Stein, while Kimbo kicks arse...

Biologist and philosopher Sahotra Sarkar is combative, to say the least. When he says what he means, it can hurt physically if you are the target. I almost feel sympathy for Ben Stein... And knowing one of the principals...

Good news, and bad news...

First, the good news. The inestimable John van Whye has added, with the help of his team of course, 90,000 scanned images of Darwin's journals, manuscripts and letters. Now the bad news. The Utrecht Herbarium is closing, and no...

Wilkins on Wilkins on The Galilean Library

In an amazing display of misjudgment, Paul Newall of the (otherwise) excellent site The Galilean Library has interviewed me about my views on the philosophy of biology. There are some serious folk interviewed there, so of course I feel...

On the decline of the humanities

I've been pretty preoccupied this week with lectures and meetings, so this is my first post for a bit. Yesterday I attended a meeting at my university which pretty well aimed to wind up the disciplines of my school...

The different epistemologies of science and religion

While it's always nice to see a scientists step up to argue that intelligent design or creationism ought not to be taught as science because they aren't science, this worries me somewhat: Scientists have failed to explain the limits...

A good German site

Evilunderthesun is a German language blog that recently did two things: totally demolished the "Nazism was caused by Darwin" trope, with generous quoting of mich, and educated me that the word for April fool in German is Aprilschmerz, which...

The F-word

Idiots and the ignorant should not speak on matters they do not understand. As I am both, I want to make some vague and ultimately useless comments about Framing, yet again. This has been motivated by Chris Mooney's admirable...

Physicists undertake stamp-collecting

Ernst Rutherford, the "father" of nuclear physics, once airily declared "In science there is only physics. All the rest is stamp collecting". By this he meant that the theory of physics is the only significant thing in science. Such...

Neuroethics - a new journal and a new subject

My friend and colleague Neil Levy has inaugurated the first edition of a journal devoted to a new field, Neuroethics, the first edition of which is available to all for free here. Neil has a convincing introductory editorial, arguing...

Can a Christian accept natural selection as true?

I once sat across the table from Alex Rosenberg, a well known philosopher, who argued persuasively that one cannot be both a Christian and accept natural selection. I think Alex intended this as a reductio for Christianity, as natural...

Species, framing, and stuff

So here's a neo-Thomist talking about species, and not getting it due to (i) prior metaphysical commitments, and (ii) not understanding Aristotle - dude, he never called anything a species, not in the biological sense. Eidos and genos were...

Expertise and ignorance

On the one hand you have Jake Young discussing the role of expertise in public debates, concluding that maybe experts shouldn't expect that information from knowledgeable folk will automatically influence the uneducated. On the other hand, this......

Barcoding redux

So, here I am in Phoenix airport, waiting to go back home, and I read T Ryan Gregory's snark about me and barcoding. Apparently I am to learn only from his blog posts and not from (perish the thought)...

Postblogging the conference

Sorry that I didn't liveblog today. The room was too far to carry my Mac, and I was tired damn it. Blame Lynch, Todd Grantham, Michael Ghiselin and Roberta Millstein among others, who all made me drink beer. No,...

Liveblogging the conference: Roberta Millstein

Roberta is a great philosopher from UC Davis and she's talking about the notion of populations....

Liveblogging the conference: Julia Clarke and Todd Grantham

This is a session on paleontology that I missed the start of because I had to go get my power supply....

Liveblogging the conference: Jay Odenbaugh

Jay is an ecological philosopher. He wants to sketch how ecologists have used boundaries, and outline both a skepticism and an interactive approach....

Liveblogging the conference: Stephen Peck

Lunch being had we crowd into a new room to hear Stephen Peck, a biologist from Brigham Young University down the road a ways in Provo. Stephen is talking about ecological boundaries....

Liveblogging the conference: Bill Wimsatt

Bill Wimsatt is somewhat of a hero around here and for good reason. He is perhaps one of the most influential under-published philosophers of biology. Today he's talking about modularity in biological and cultural evolution....

Liveblogging the conference: Jim Griesemer

Jim Griesemer is one of my favourite philosophers. Here he's discussing the work of Herbert Simon on dynamical boundaries....

Liveblogging the conference: Piotrowski

Monica Piotrowski (Utah) also is talking about DNA Barcoding. She starts with a child's coin sorter. Imagine that it's a bug-sorter, sorting by DNA samples. What does the child now have? She claims Barcoders must have a species concept...

Liveblogging the conference: Mishler

Brent Mishler is a very nice guy who is wrong on a few things - Phylocode, species, and so on - but he's absolutely right about barcoding. He's talking today about so-called DNA barcoding and species concepts....

When philosophers really embarrass themselves

I have just sat through one of the most teeth clenchingly bad philosophy talks, given on phylogenetics by a philosopher who has never read anything sensible on phylogenetics to phylogenetic systematists. One of the last mentioned leant over to...

Just so we know who we're talking about

Below the fold is a humorous and possibly true account of reality TV trying to include geologists. With appropriate substitutions, the same thing could be said of any academic......

Whew! (Spiders!)

After a three day workshop on the future and nature of taxonomy (or systematics; I'm still unconvinced there's a difference) I am exhausted and enthused. The former because of the massive amounts of beer we drank, and the latter,...

Wilkins in foreign climes

Well, actually the weather in Tempe, Arizona, seems to be very much like the weather here in Brisbane, but that's where I'm going. For a couple of weeks. Also in Salt Lake City. So blogging shall be sparse unless...

Mechanism, informationism and Ockhamism

Welcome to this week's edition of Isms. In a couple of posts, Scibling Alex Palazzo of The Daily Transcript has given two quite distinct views of what biology is about: information, and mechanism. In the first he argues that...

Taxonomists and bad history

In a recent paper on biological nomenclature in Zoologica Scripta, Michel Laurin makes the following comment about the stability of Linnean ranks: However, taxa of the rank of family, genus or species are not more stable. ... This sad...

New Companion to Philosophy of History

From The Blackwell Companions to Philosophy series comes A Companion to the Philosophy of History and Historiography edited by Aviezer Tucker. It looks fascinating, especially essay 36 on Darwin......

The cultural canoe

A new paper, unfortunately not yet available to nonsubscribers on PNAS's Early Edition, has done some remarkable work on the evolution of canoe designs, putting some meat onto cultural evolutionary models....

Lectures. Huh. What are they good for?

As I prepare my lectures for this semester (Australian universities start the academic year in late February, early March, apart from those poor sods who have summer semesters) I am moved by Moselio Schaechter's little essay In Defense of...

The "design" mistake

Back when Darwin was a student at Cambridge, he read, and almost memorised the Rev William Paley's Natural Theology, and thereafter remained impressed by the obvious adaptiveness of the parts of organisms and their interrelations. As is well known,...

Math assholery

In particular, see the final panel... Cf. also here on Private Languages in philosophy...

What is a disease?

Biology does normativity all the time. There are things that are the "normal" type of state of a species, an organism, an ecosystem, and so on, and things that are abnormal. But the puzzling thing is that all philosophers...

What's so cool about Darwin?

So, it's Darwin Day tomorrow my time. So what? What's so great about Darwin?...

Pro-Test, two years later

Some of you may recall I was immensely impressed by Laurie Pycroft, a 16 year old who started Pro-Test, which defended the use of animal models against the vicious and largely unthinking nastiness of animal "rights" protesters. Now Nick...

Another stupid piece of DNA worship

By Matt Ridley, in Time: ... by the end of this century, if not sooner, biotechnology may have reached the point where it can take just about any DNA recipe and read off a passable 3-D interpretation of the...

Meanderings and messages

So, it seems that 44 is the median age of depression. Old news, or at least it is for me. Although for 44 to be the median age of depression for me, I'd have to live until my late...

Does religion evolve?

Here's a comment that represents a widely held misconception about the evolution of religion: Whenever there is an discussion about religions and changes in religions someone always pulls out the argument that religions evolve. I am very sorry but...

Popes, evolution, and creation

A rather cute article at the Catholic News Service says this: In commentaries, papal speeches, scientific conferences and philosophical exchanges, the Vatican has been focusing more and more on the relationship between God and evolution. From the outside, this...

Nature makes no leaps...

Reacting to Jerry Coyne's guest blog on The Loom, Brian Switek at Laelaps discusses, among other things, the objection to Darwin's theories that Huxley put forward, both in personal correspondence and in print: The only objections that have occurred...

Measuring extinctions

In 1972, David Raup published an influential paper on taxonomic diversity during the Phanerozoic. In that paper, he estimated extinction rates based on the number of fossil families and genera for the period and before and after. The idea...

Happenings

So, I just found out that I'm teaching this semester, which is a comfort (money will come in, and we can eat) and a pain (I am going to Arizona in March, so we will have to sort out...

A lucky man

... sorry I could not travel both And be one traveler – Robert Frost It was a typical hot and humid summer's day, so I entered a nice dark bluestone pub, hoping the dark would offer some cool and...

Why not information?

OK, so by now a number of you are either quite puzzled or are up in arms about this notion of mine that genes aren't information. First I'll recap and then make some general philosophical and historical points....

A plea for the pope

This isn't something I would often write, but I think that the recent protest against the Pope speaking at the secular university La Sapienza in Rome is misplaced. Critics say that the Pope, when he was of more humble...

Is information essential for life? No.

A recent New Scientist article poses the often-posed question in the title. The answer is mine. Forgive me as I rant and rave on a bugbear topic......

Students publishing

TR Gregory at Scientific Blogging asks why advisors would encourage their students to publish. One of the reasons is: Most of the graduate and undergraduate students with whom I have worked directly have been quite excited by the possibility...

Is there a physicist in the house?

One of my colleagues just raised a point I hadn't thought of vis á vis Special Relativity. I had always thought that an observer on a photon would not experience time. My colleague suggests that each frame of reference...

Stuff, not nonsense

Some things I spotted today.....

Is postmodernism retreating?

Rob Helpy at Big Monkey, Helpy Chalk, has a post on what postmodernism was and why it came about. In it, he says he thinks it is a dying fad. Is this true?...

Roundup

Some bloggable items not worth a post on their own:...

NYE: the aftermath

OK, so the next door party finished about 1.30, but the family disputes finished about 5 am, so instead of thinking, I'm going to let others think for me, and round up a few New Years Day links......

Judging experiments

This is a field in which I am largely ignorant, so I will just report it and leave the commenters to interpret. Collider blog has a discussion of an idea reported by Charm &c. in a paper at arXiv...