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Alex Palazzo is a postdoctoral fellow working in the Department of Cell Biology at Harvard Medical School.

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March 31, 2006

Mystery in the Pseudointellectual Boston Scene

Category:

Weird things are afoot. It all started last time the crazies got together. We had our fill of food and drink. The conversation had turned to nudist beaches and the next thing we knew, books were stolen, a member was...

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Caltech Postdoc Survey Parsed by Gender

Category: Lab Life

So a couple of weeks ago, I wrote an entry about gender and science. I encourage you not only to read the post but also the comments. In that post I mentioned a 2003 Caltech postdoc survey that parsed some...

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Bravo Harvard

Category: Education

Harvard announced yesterday that it would waive tuitions for undergrads whose families earn less than $60,000 annually. From the Harvard Crimson: The newly expanded financial aid program, which will also reduce the contributions of families with annual incomes between $60,000...

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March 30, 2006

NIH Budget

Category: Science & Society

If you haven't, go and read to evolgen's entries on the Specter-Harkin Amendment that successfuly passed in the Senate to increase the NIH budget. Next up is the House. If you care about basic research in the biomedical sciences contact...

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Update from Life Science Industry

Category: Lab Life

Last night I was at another party in Cambridge, a good friend of mine is leaving Boston to go work for Pfizer in NYC. (Aside - why does it seem like anyone in Cambridge who is not a student or...

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March 29, 2006

The Sound and Taste of Revelation

Category:

Remember that special moment when everything changed. Were you listening to a particular song? Or was it some food? Well a couple of friends just posted about such associations. The first is from Tall Med Student, a former Harvard postdoc...

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Computing Signals

Category: Pure Biology

OK after making fun of System Biologists out comes Peter Sorger's latest paper in Cell. In this paper, Sorger's team collected almost 8000 intracellular measurements (they collected some of the data directly and got the rest from the literature -...

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March 28, 2006

Systems Biology DNA Prep???

Category: Retrospective

(from the archives) Once upon a time, we made the necessary chemicals from scratch to purify DNA from bacterial cultures. These days, for a couple of dollars, you can get all the reagents you need all packaged in a nice...

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March 27, 2006

To watch a strand of DNA replicating

Category: Pure Biology

The van Oijen lab (here at HMS) had a nice paper in Nature where they indirectly observe single T7 DNA polymerase complexes copying DNA. How do they do it? One end of the DNA is fixed while the other side...

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Organelle Quiz

Category: Misc

Want to be a Cell Biologist? Take a look at this phase image of a rat hepathocyte (liver cell) that I took sometime last year. Try to identify the three mystery organelles A through C And to be totally clear:...

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X-Ray Poetry

Category: Lab Life

Well after that mRNA song, I got wind that there is an x-ray crystallography poem floating out there. So we searched, and searched. Finally undercover agents from the Steitz lab emailed the sought-out credo to our contacts. Allegedly, this poem...

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March 26, 2006

I'm good enough, I'm smart enough, and doggone it, people like to read my blog.

Category: Science & Society

So I've been bumping into this idea on several blogs (idea? or is it a cult? ... I refuse to call it a meme, sorry Richard). I have some trouble understanding what it all means. Is it hard, as in...

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Great Quote on Mentorship

Category: Retrospective

(from the archives) Prodded on by my father, I read David Wick's Infamous Boundary, an account of the history of Quantum Mechanics and of the EPR controversy. In the book, there is a nice passage about mentorship ... for those...

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March 25, 2006

Nice OpEd by Derrick Jackson

Category: Science & Society

In today's Boston Globe, Derrick Jackson echoes what we in the sciences have been worrying about. From his OpEd: Nobel laureate and Princeton physics professor Joseph Taylor this month said on Capitol Hill that budget cuts will drive future astronomers...

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March 24, 2006

Exponential Decay of Quality Data

Category: Lab Life

We've noticed that our cumulative knowledge of any individual process is inversely proportional to the number of researchers striving (i.e. contaminating) to gather data. Take APC, no not that APC, but the Adenomatous Polyposis Coli ... too many people study...

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And now a lesson from your local T-Rex

Category: Misc

Damn those Intellectual terrorists!

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March 23, 2006

Geek Taxonomy - Day 2

Category: Lab Life

Well lets see where are budding endeavour has gone. 4 Scienceblog bloggers are heading this joint project. So far we have collected a measily 4 entries, a ton of comments/emails from disgruntled scientists, and a rusty can openner. My favorite...

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Clash of Secularism and Religion

Category: Science & Society

Very interesting video (actually snipets from Al-Jazeera)....

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Origin of Life Review

Category: Pure Biology

I was notified of this review in PLoS-Biology by Richard Robinson. It gives a nice outline of the current thought in the field and delineates the genes first vs. metabolism first views (although in my not-to-much-of-an-expert opinion, I don't think...

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March 22, 2006

Listen up all you ...

Category: Lab Life

Evolution biologists, ecologists, epidemiologists, earth scientists, herpetologists ...

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How to overload your neocortex

Category: Science & Society

Here's a site for you - Visualcomplexity.com...

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Life on Mars?

Category: Misc

Yes this video has been going around. But if you haven't seen it ... from the vaults of SubGenius .... here's ...

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March 21, 2006

New Fiction Book on Lab Life

Category: Science & Society

I just read this interview with Allegra Goodman, author of the new book Intuition. What is the book about? From the NY Times: A postdoctoral student at the Philpott Institute in Cambridge, Mass., has an astonishing result: a virus he...

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The Disciplines of the Life Sciences

Category: Lab Life

I have been often asked what the differences are between the various subdisciplines of the biomedical (or "life") sciences. That's a tough question - but I'll give it a try ... Biochemist: Basically biochemists play with proteins. Usually this involves...

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March 20, 2006

Measuring Gene Expression, One Molecule at a Time

Category: Pure Biology

Although there is a trend in the life sciences towards big Biology, recently all the greatest insights have come from studies of single molecules. Some of the best work has come from Stephen Kowalczykowski's group. They have used single particle...

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March 19, 2006

Mysterious Posts in the Boston Pseudointellectual Scene

Category: Misc

Well I finally posted photos from the last bookclub meeting, although some call it the food orgy club. Then someone alerted me that a new challenge was posted on the Socart blog. Paint and burn. Cool. Can't wait....

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Educational Madness

Category: Misc

I'm not a big fan of March Madness (for non-Americans March Madness is the term used to describe the huge college basketball tournament held this time of year). Why? Perhaps because I'm Canadian. Perhaps because I don't think the lure...

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March 18, 2006

Saturday Cartoons

Category: Misc

OK a pet peeve of mine is how scientists are portrayed in the mass media (especially biologists aka those mad lab coat dressed, atheists who play god and create GMOs). Having said that, I just love Pinky and the Brain...

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More Science Songs

Category: Lab Life

I got this email about the ribosome waltz, click here to listen to the mp3. And there's a lot more from where that came from, like this sweet song. These ditties were composed and performed by Greg Crowther from...

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March 17, 2006

Review on RNA Granules

Category: Pure Biology

After posting some microtubule stuff, it's time for an entry about mRNA. RNA granules are very intriguing. They are thought to transport RNA in some cell types such as neurons or Oocytes, and store/degrade mRNA in other cell types. Recently...

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Friday Eye Candy

Category: Pure Biology

From the archives, here's a micrograph of a fibroblast (connective tissue cell) adherring to fibronectin coated coverslip. The cell was immunostained for regular microtubules (red) and modified detyrosinated microtubules (green, although since these are only partialy modified red+green = yellow)....

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March 16, 2006

Extra Data Points on Gender and Science

Category: Science & Society

Early last year when the whole Larry Summers saga broke out, I posted some data on gender and science that was floating in the public sphere. Here I've reposted some of this data. THEN I'll tell you some recent data...

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The Best Parts of the Scientific Life

Category: Lab Life

(From a previous entry on my old blog) After having written about the worst, why not write about the best things about science? Here goes: 1 - Discovery. One of the greatest feelings I've ever had as a researcher was...

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March 15, 2006

The Worst Parts of Scientific Life

Category: Lab Life

The lack of posts in the past 3 days was caused by our departmental retreat. All the talking and drinking with my peers in the Cell Biology department, made me think of a couple of posts that appeared in my previous blog ... The Worst Things About Science. So here they are (in no particular order):

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Amateur Sumo Wrestling Robots

Category: Misc

My brother posted some videos of the autonomous sumo wrestling competition he holds every year at Concordia University in Montreal. To see the videoclips from the 2006 (and previous) competition(s) visit robowars.ca....

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March 14, 2006

Live Surgery Online Tomorrow

Category: Misc

Ever wanted to see a minimally-invasive thoracic aortic aneurysm repair? Visit OR-Live, tomorrow starting at 4:00pm EST to see the whole operation live. Yes live. Not only can you watch them slice through the tissues but you can actuyally email...

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March 12, 2006

A Reaction Chamber for Fatty Acid Synthesis

Category: Pure Biology

Fatty acid synthesis consists of tethering an an acetyl group (2 carbons) to ACP (Acyl Carrier protein) that then bounces around to 5 different enzymes to add 2 carbons to the end of the acetyl group. This process is...

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March 11, 2006

Jared Diamond

Category: Science & Society

I was way too busy to go to Jared Diamonds three talks, however I know someone who attended two of them. To read about "Master Diamond's" lectures, visit Tulula's Blog....

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March 10, 2006

BC's Newest Video

Category: Lab Life

BC has a new video (it took me a whole freakin week to notice!) Check it out at the Bartholomew Cubbins on RNA blog....

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Ribose & Cassini

Category: Pure Biology

Last night, my wife and I had dinner with a friend of ours from the Szostak Lab. There we discussed Capote (we just saw the movie) and the existence of ribose in a pre-biotic earth. Apparently it is unlikely that sugars, such as ribose, would have been in high concentrations in the hypothetical chemistry of primitive earth ...

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The Infamous Interviews

Category: Retrospective

OK, here is a collection of interviews I conducted over the past couple of months over Instant Messenger. No animals were harmed in this production (this statement was inspired by last night's dinner at Buddhas' Delight) Have fun ...

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March 9, 2006

Cephalopod Poem for PZ

Category: Misc

Ok time for a corny entry ...

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March 8, 2006

Explorers & Crusaders

Category: Lab Life

You can clearly divide scientists into two categories, those who build new models and those who prove old models. The explorers and the crusaders. Usually the former are seeking the truth, or something close to it, while the latter are...

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March 7, 2006

Tuesday Morning Science News

Category: Science & Society

Want to study lava? From the NY Times ... Fudge, corn syrup, and whiskey will do. And I love this quote about science conferences: The poster session, which resembled a science fair for professional scientists, was dedicated to innovative lecture...

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March 6, 2006

Magnetosome Alignment

Category: Pure Biology

... These organelles are usually aligned in long chains that orient along the earth's magnetic feild and help these criters to swim north or south! This comment reminded me that there was this great paper in Science from a couple of weeks ago where researchers from Caltech describe how MamK, a homologue of the cytoskeletal proteins MreB and actin, forms long filaments that act to lign up magnetosomes...

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March 5, 2006

Jared Diamond to Give 3 Lectures

Category: Science & Society

For those of you in the Boston area, the author of Guns Germs and Steel, and Collapse is giving 3 talks at Harvard this week. Wednsday, March 8 Continental differences in human history Jared Diamond, University of California, Los Angeles...

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Unionizing Postdocs

Category: Lab Life

This topic is discussed in a recent article in Science. Currently, the only postdoc union is at the University of Connecticut Health Center. And what happened there? ...

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March 4, 2006

The mRNA Song

Category: Lab Life

Well I am trying to decide whether to attend this year's RNA Society Conference. As I'm a neophyte to the field (my PhD thesis was on microtubules in migrating cells), I learned quite a bit at last year's meeting. But...

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March 3, 2006

Media Buzz over Gold and Autoimmune Disease

Category: Science & Society

Well some discoveries are flashier than others. And to get the media's interest make sure your finding can be summarized with some catchy slogan and/or pun. From a post on my old blog: So my blog's been suffering from neglect....

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The Origin of the Nucleus

Category: Pure Biology

I just read a fascinating "hypothesis" in the latest issue of Nature entitled Introns and the origin of nucleus cytosol compartmentalization. The greatest divide in the living world exists between prokaryotes and eukaryotes (yes I know, there are viruses ......

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March 2, 2006

The transcript is degraded, but a new one is synthesized

Category: Misc

Being plagued by creationist ads, I moved my blog from Tripod to Blogspot. Then, as one person later said, I was Degoogled. Finally after being invited to move to Scienceblogs, I ditched my old blog. So I'm finally here.

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