Copy number variation in genes

A new paper in Nature, Global variation in copy number in the human genome, suggests that it isn't just SNPs that matter in regards to human variation. Those of you who are "in the know" aren't surprised, so this press release is a bit much. Along with a focus on gene regulation, this is a fascinating new area which expands our understanding of how we are how we are beyond the raw sequence. p-etr at my other blog has a lot more. RPM has a post scheduled on this topic, I saw a preview when he published it to make sure it looked right. The press is making a big deal out of this, so we'll see where it goes....

Addendum: Why does gene copy number matter? The most obvious way is that more gene is proportional to more transcription which results in more translation which results in more final protein end product. Sometimes this is good, sometimes it is not so good, and sometimes it doesn't matter. Genetics and Health has much more. And here's an article in The New Scientist and another in The TImes.

Exod 23:13 And in all things that I have said unto you be circumspect: and make no mention of the name of other gods, neither let it be heard out of thy mouth.

Tags

More like this

Sound familiar? Well, good things come in pairs. A few days ago I posted on a paper which used a linkage analysis to come to the conclusion that an SNP on HERC2 was responsible for the variation in eye color in Europeans. Some background, a gene, OCA2, was implicated in the variation in eye…
When Wilhelm Johannsen coined the word "gene" back in 1909 (hmmm, less than two years until the Centennial), the word was quite unambiguous - it meant "a unit of heredity". Its material basis, while widely speculated on, was immaterial for its usefulness as a concept. It could have been tiny…
Last year a group out of Australia published a paper which purported to explain eye color variation based upon a polymorphism around the OCA2 locus. The paper was A Three-Single-Nucleotide Polymorphism Haplotype in Intron 1 of OCA2 Explains Most Human Eye-Color Variation, and I blogged it here.…
I wonder what the loons at Age of Autism will say about this. Actually, I know what they'll say. Whenever a scientific study like the one just published earlier this week the top tier journal Nature, which examines genetic variations (CNVs) associated with autism and autism spectrum disorders (ASDs…

It seems that less and less DNA really matters when you think of genetic variation, epigenetics and alternative splicing...

I'm not sure what that's supposed to mean. what are genetic variants if not variations in DNA?

I believe he or she did not put "genetic variation" as opposed to DNA, but instead meant that, despite of the genetic variation, "epigenetics and alternative splicing" play a considerably big role, minimizing relatively the role of minor genetic variation. I guess.

By Danniel Soares (not verified) on 02 Dec 2006 #permalink