Computing

Because I must trim browser tabs, here is a current short list of things that might be useful: Threebody - online implementation of the open source IAS15 integrator - a 15th order high precision N-body integrator - ASCL - Astrophysics Source Code Library - Open Source Code Visible Spectra of the Elements - Except Astatine :-( Astronomy Simulators - small web simulators for elementary concepts. Some quite nifty. From University of Nebraska. All the Kepler 2 Campaign 0 data - with some tools to play with it
So, as you may or may not have noticed, ScienceBlogs has gotten a makeover. If you read via RSS, you might not notice anything, but if you come to the blog itself, you'll see a new look. The previous three-column layout is gone, and posts on the front page now show only short excerpts and "featured" images. This makes us look more like the blogs at National Geographic, the new Corporate Masters (for a good while now, actually, but they only just did the redesign). On the back end, we've changed from Movable Type to WordPress, which will take a little getting used to, but which lots of people…
1 And the LORD looked upon the earth, and, behold, it was corrupt; for all flesh had corrupted his way upon the earth. 2 And the LORD said unto Noah, The end of all flesh is come before me; for the earth is filled with violence through them; and, behold, I will destroy them with the earth. 3 Make thee an ark, and this is the fashion which thou shalt make it of: The length of the ark shall be three hundred qubits, the breadth of it fifty qubits, and the height of it thirty qubits. 4 And Noah asked the LORD, What is a qubit? 5 And the LORD replied unto Noah, A qubit is a two-level quantum…
In 2007, my friends at m ss ng peces and I started work on a new Internet-television show called RESET, for the Sundance Channel. The idea was to make a show designed for computers to watch, that could teach them what it was like to be human -- a show that, while ostensibly made for human beings, would also nourish our computers' circuit boards with generous descriptions of the richness of human experience. Obviously this is just an artistic conceit, and not, as far as I know, a practicable reality, but it does raise a lot of interesting questions. You probably spend your entire day within…
To prepare for a "Book Sprint" I'm participating in at the STUDIO for Creative Inquiry at Carnegie-Mellon University next week, I've been doing lots of research about notable historical interactions between art, science, and technology. In suit, Universe fringe benefits! First, I'd like to tell you about "9 Evenings," organized in 1966 by a very interesting engineer named Billy Klüver with the help of the great American artist, Robert Rauschenberg. Klüver is a fascinating character, a brilliant engineer who saw the potential in the integration of art and technology, and noticed an absence…
A few months ago, I attended Cyborg Camp in my hometown of Portland, Oregon. Cyborg Camp is an "unconference," basically a room full of cyberpunks, mega-nerds, and aspirational coders that gather in an office building to talk about the "future of the relationship between humans and technology." This event deserves a separate entry, but for now I'd like to recall a particularly evocative thing: that the most heartbreaking thing I saw at Cyborg Camp was an adult man hopelessly tangled in a web of cables. It was his own off-the-shelf wearable computing system, a gordian thing connecting his…
In case you didn't know, reality is science fiction. If you doubt me, read the news. Read, for example, this recent article in the New York Times about Carnegie Mellon's "Read the Web" program, in which a computer system called NELL (Never Ending Language Learner) is systematically reading the internet and analyzing sentences for semantic categories and facts, essentially teaching itself idiomatic English as well as educating itself in human affairs. Paging Vernor Vinge, right? NELL reads the Web 24 hours a day, seven days a week, learning language like a human would -- cumulatively, over…
I decided to try using Google Chrome as a web browser. The reason is that it is supposed to be faster, particularly for sites that make heavy use of Flash. It turns out that installing it is a hassle if you do it the obvious way, because Flash does not work without fiddling around. That sort of defeats the purpose. The easier way is to use the one-click install at: http://software.opensuse.org/ymp/ope...2/chromium.ymp. This adds the necessary repositories, downloads the application, and configures it so that flash works right away. It seems to work pretty well. It remains to be seen…
Audio documentarian, local hero, and Pharmboy family friend, Richard Ziglar, let us know over the weekend of some employment opportunities for music and tech-minded folks at Zenph Studios in Research Triangle Park. What is Zenph, you ask? Zenph takes classic piano recordings, often from long-departed performers, dissects them digitally to capture nuances of the live performance, and then "re-performs" them live in a recital hall on legendary Steinways driven by the software. These are *not* digital remasterings but recordings of an actual replaying of the original work. Listen to this…
This is a tip for selecting the fastest DNS server.   href="http://www.opendns.com/">OpenDNS already has fans at ScienceBlogs ( href="http://scienceblogs.com/pharyngula/2007/08/turkish_ass_shuts_down_a_slice.php">1 href="http://scienceblogs.com/effectmeasure/2007/08/connectile_dysfunction.php">2).  I've been using it for years.  But now that href="http://code.google.com/speed/public-dns/">Google has their own free/open DNS service, the question arises: which is better?  Or is there a different one that is better?  OpenDNS is free for anyone to use, but they also offer paid…
While working on a science-rich post and writing an exam, something came across Twitter that is, well, too good to just be seen only on Twitter. Fullsteam is the name of the plow-to-pint Southern microbrewery in Durham, NC, no-longer-in-planning-but-not-quite-done and I have written about the tweeter several times. The imagination behind brewing a beer with sweet potatoes (it's awesome, btw) or kudzu comes from the very same mind that burped into his iPhone for the benefit of shared education with his daughters. The result: I use Google voice search all the time and have been very…
If you encounter a web site that contains malware (virus, trojan, etc.), how do you report it?  I had a devil of a time finding out.  A friend had forwarded a suspicious email to me.  The email contained a link.  The link indicated that it would take you to a text file that explained a finding about a chance of an asteroid hitting the Earth next year.  the file ended with .txt.exe, obviously a bad thing.  So I downloaded it, using Linux, of course (the .exe would not be able to do anything without me affirming that the file was to be opened with WINE, which I did not plan on doing).  I…
The New England Journal of Medicine has four open-access articles of the topic of electronic medical records (EMR).  One article reports on a survey of the characteristics of EMR in use, and the extent to which they have been adopted within US hospitals.  The second discussed the barriers to the more widespread adoption of EMR.  The third compares and contrasts the two models of EMR: stand-alone personal systems, and integrated systems.  The fourth addresses the question of how to make the best use of the money devoted, in Obama's economic stimulus plan, to the promotion of EMR. Use of…
Responding to the innate human desire to have the faster browser possible, I am almost happy with Firefox 3.  But not quite.  Thus, the experiment: compile from source.  This is accomplished as follows: 0. Kubuntu does not come with the packages necessary to build from source, by default.  You must install a bunch of stuff first.  Fortunately, this is easy.  To install the prerequisites necessary to build Firefox from source, open a terminal and type: apt-get build-dep firefox 1. Download the Firefox source code href="ftp://ftp.mozilla.org/pub/mozilla.org/firefox/releases/3.0/linux-i686/…
40% of Internet users do not upgrade their browsers to the most secure version.  Internet Explorer users have the worst record, with more than half having failed to update. OK, people, do your patriotic duty and get with the upgrades!  Then we can see the National Threat Advisory go down to blue, for the first time in history. (source: href="http://arstechnica.com/news.ars/post/20080701-40-of-surfers-dont-bother-with-browser-security-updates.html">Ars Technica)
I scarcely need to mention it, but today is the big day: Firefox 3 is out, so be sure to download it.  The Mozilla folks are href="http://www.spreadfirefox.com/en-US/worldrecord/firefox3">shooting for a world record for the most downloads in a single day. href="http://www.internetnews.com/software/article.php/3753196/Will+Linux+Users+Miss+Out+on+Firefox+3.htm">Will Linux Users Miss Out on Firefox 3?  Silly article.  Download the source.  Configure, make, make install. Just order a pizza first, because compiling it from source takes a while.  But so does eating a pizza. Actually…
On 26 March 1874, the great poet href="http://en.wikipedia.org/wiki/Robert_Frost" rel="tag">Robert Frost was born.   Perhaps it is not so notable, but 26 March 2008 is the first href="http://documentfreedom.org/News/20080220" rel="tag">Document Freedom Day.   Early in the development of computer technology, the world decided to take the well-traveled road: the road of proprietary document formats.  This path led to endless headaches, unnecessary costs, and the inability of people to use their machines to their full potential.  It created obscure vectors for the spread of viruses…
It amused me today to see two blog posts, both about users switching from Gentoo to *buntu.   rel="bookmark" title="Permanent Link: Why I am making the switch from Gentoo to Kubuntu">Why I Am Making The Switch From Gentoo To Kubuntu href="http://fxjr.blogspot.com/2008/03/bye-gentoo-welcome-ubuntu.html"> Bye Gentoo... Welcome Ubuntu Gentoo is the most complicated version of Linux, but also the most customizable.  It enables the user to squeeze the greatest performance out of their machines.   Like the authors of the two posts, I recently switched.  I had been using Sabayon, a…
Usually when we think of href="http://en.wikipedia.org/wiki/Electronic_medical_record">electronic medical records (EMR) as being three-dimensional, we think of the relational aspect of databases.  Researchers at IBM, however, are testing a different concept. The idea is to have a rendered 3D representation of the anatomy of the patient, and to use that as a basis for the record.  This is reported in IEEE Spectrum. href="http://spectrum.ieee.org/jan08/5854">Visualizing Electronic Health Records With "Google-Earth for the Body" By  Robert N. Charette January 2008 href="http…
I know I've been a bit lax with this blog lately, but just in case anyone still cares, and has a mobile device (such as a Palm Pilot, smart phone, etc.) you now can get the RSS feed for Corpus Callosum on your device.  You have to use the href="http://www.avantgo.com/">AvantGo service.   If you want, follow the AvantGo link, and download the software, then install it on the computer you use to sync your mobile device.  Then go through the setup as directed by AvantGo.  Then come to CC and click on the AvantGo button in the left sidebar (where it says Quick Add-Feed Links).  That's it (…