evolution

I had a conversation with Tony Ortega about L. Ron Hubbard's book, A History of Man: Antediluvian Technology. He is the author of a blog, Tony Ortega on Scientology, and he had cruelly sent me a copy Hubbard's book specifically to inflame my already enlarged outrage gland. The post there emphasizes everything Hubbard got wrong about evolution, but let me tell you: there isn't much evolution or history of Man in History of Man. The bulk of this book, written in the preening style of a pretentious fourth-grader, weebles on and on about his tech and how it can cure cancer, illuminated with…
You know I was really pissed off at the crap ENCODE was promoting, that the genome was at least 80% functional and that there was no such thing as junk DNA. And there have been a number of better qualified scientists (like W. Ford Doolittle and Dan Graur and many others) who have stood up and registered their vehement disagreement with that nonsense. But there are some who agree that the genome must be largely functional, like John Mattick. Larry Moran reminds me that Mattick is the author of this infamous chart, however, which is best known as the original Dog's Ass Plot. That is so…
My upcoming visit to Houston to join Aron and others in protesting Texas creationism is smoking all kinds of interesting characters out of the woodwork. Meet Dr. David Shormann (the "Dr." must be his first name, he sure flings the title about), who has apparently been a person of some influence in shaping the Texas Board of Education policy. He's also a flaming young earth creationist who has drunk deeply of the Answers in Genesis kool-aid, and is very, very angry at the vicious, intolerant atheists who are coming to his city to argue against his nonsense. The freethoughts activists are…
The best mysteries are ones where the reader, if they are following along carefully, can figure out the answer to the problem as the lead characters do. If you read science blogs and love evolution, then you know exactly where this is headed: Molecular evolution in court: analysis of a large hepatitis C virus outbreak from an evolving source. Lets say you are an epidemiologist, and youve noticed something peculiar-- numerous individuals have turned up with Hepatitis C infections. Well, people get HepC all the time, thats not noteworthy. BUT... there were a *lot* of people getting sick. Not…
Reproductive Success (RS) is defined in many ways in different places by different people, but one of the most common definitions is simply the number of offspring an individual produces. This definition is further modified in most cases to mean only those individuals that will be fertile, i.e., capable of producing further offspring. RS is important in understanding Natural Selection (NS). In the simplest model, a heritable feature that increases RS will be selected for over time in a population because individuals with higher RS will contribute more offspring to future generations and this…
There is now a video and a transcript of the Evolutionary Psychology Panel at CONvergence 2013. Many of you, when you watch this, will become enraged at things said by the panelists. Rumors of what was said had already been spread around on the internet and as I understand it Jerry Coyne and Stephen Pinker have already become enraged. Or maybe the loved it. I'm not sure. If you want me to respond to any of your enraged rage regarding anything that was said, or for that matter, if you have anything at all ... negative, positive, informative, whatever ... to contribute to the conversation…
Ever wonder what dogs and hyenas have in common? Would you be surprised to learn that hyenas are more closely related to cats than dogs? In fact, according to this video thesis, the shared bone-crushing abilities of dogs and hyenas is actually an example of convergent evolution.
I am currently watching a re-run of the NOVA special called Dogs Decoded. If you have not already seen it, you should check it out! It was actually the subjects of a prior blog that you can read here. 
I know you're thinking we've had more than enough discussion of one simplistic umbrella hypothesis for the origin of unique human traits — the aquatic ape hypothesis — and it's cruel of me to introduce another, but who knows, maybe the proponents of each will collide and mutually annihilate each other, and then we'll all be happy. Besides, this new idea is hilarious. I'm calling it the MFAP hypothesis of human origins, which the original author probably wouldn't care for (for reasons that will become clear in a moment), but I think it's very accurate. A list of traits distinguishing humans…
Bone fragments used for sequencing the ancient horse genome. Image credit: LUDOVIC ORLANDO as published in The Scientist. Researchers have successfully created a draft sequence of the complete genome of a 700,000 year old horse from a bone fragment extracted from permafrost in the Yukon Territory (Canada). This is the oldest specimen ever sequenced by almost 10-fold. Prior sequencing of the whole genome from a hominid from Siberia who lived 80,000 years ago was the prior record holder. It is amazing to me that they were able to recover the entire genome from such an old specimen! These…
Gang, don't try this at home. I'm a trained professional, so I can get away with it, although I do face extreme risk of brain damage. I am reading two books at once. OK, that part isn't too scary, I'm actually just alternating between the two — an hour with one at lunch time, an hour or two with another before bed. I trust you all are able to do this, no problem. It's the pairing that is the killer. In one corner, I'm reading the marvelously detailed, juicy, thought-provoking The Cambrian Explosion: The Construction of Animal Biodiversity by the highly regarded scientists, Erwin and Valentine…
Find out why most species of birds do not have a penis in this video abstract of new research published yesterday in Current Biology: Source Herrera AM, Shuster SG, Perriton CL, Cohn MJ. Developmental basis of phallus reduction during bird evolution. Current Biology Published online June 6, 2013. doi: 10.1016/j.cub.2013.04.062
Typically, snails coil as they grow. The exact shape and characteristics of the coil are known to be a combination of genetic and environmental factors, depending on the snail. There is an interesting story involving snails and the young Jean Piaget. Piaget is famous for his work in psychology, but before that, when he was quite young, he worked with birds and mollusks. His work was published and otherwise disseminated and experts in these areas, unaware that he was a teenager, assumed he was an adult expert on natural history. Anyway, Piaget studied, among other things, a group of snail…
In behavioral biology there is a fair amount of attention to individual quality, which may be determined by genes or parasite load or energy balance, or some interaction among these (and other) factors. Individual quality is honestly indicated by some trait or behavior; a large bright thing hanging of your head, a long bout of complex and energetic dancing, or a very loud complicated song, may be impossible to achieve in an individual with insufficient energy or some sort of disease. Therefore, other individuals looking to choose a mate can observe the traits or behaviors and do what the…
Astrobiology Future The NASA online discussion session on the Astrobiology Roadmap continues this week. This morning there was a web chat on "Early Evolution of Life and the Biosphere", which is being followed up by an ongoing online discussion on the questions posed and soliciting ideas for priorities in research direction. The questions being discussed are: How has the exponential growth in our discovery and understanding of exoplanets impacted the kinds of questions and information we extract from the early Earth record? Are there problems you think are vital to understanding the early…
Heroes should never be forgotten, but unfortunately too many of them in the field of science go missing from our classroom textbooks. Equally disturbing is that a disproportionate number of these heroes overlooked are women and minorities. While the average American young person will likely have no trouble detailing the latest antics of such stars as Ashton Kutcher, Lindsay Lohan, or Kanye & Kim, most, sadly, would be hard-pressed to tell you who the following trailblazers in science were: -- Molecular biologist Rosiland Franklin, who was responsible for much of the research and discovery…
The future of Astrobiology research within NASA is being set now. Next week there are further opportunities for community input.The online discussion for Solar System Exploration wraps up today! If you are an active researcher, a student planning on getting into astrobiology, or an interested member of the community, this is your chance to provide input on the direction of research. This is your future. Be there, or we will choose for you. The NASA Astrobiology Roadmap exercise is under way, and will continue over the next two weeks. NASA Astrobiology The next two topics will kick off…
Here is a presentation by Genie Scott of the National Center for Science Education. Far more people are climate change deniers than evolution deniers, but both camps use similar strategies to promote their views. Genie Scott explores the connections, the similarities, and the divergent ideologies. Where: New York. When: 10/23/2011. Hosted by the New York City Skeptics.
My friend and colleague, executive director of the National Center for Science Education's Genie Scott, will retire by the end of the year. She's been director of the NCSE for 26 years. Genie is a key player, perhaps the key player, in the battle to keep science in the classroom and other things that are not science out of the classroom, in public schools. She's gotten piles of awards and has done a huge amount of great work. While a lot of people have been involved in this fight, I think it is fair to give Genie top billing in such major and momentous efforts as the fight in Dover (which…
Alfred Russel Wallace. Image from: NPR, Hulton-Deutsch Collection/Corbis Darwin is the more famous of the two when it comes to thinking about who came up with the theory of evolution. However, a man named Alfred Russel Wallace co-discovered the theory. Alfred Wallace died 100 years ago. In honor of his contribution to the theory of evolution, NPR ran a wonderful story about him and his discoveries the other day. Just in case you did not get a chance to hear it, you can either read the transcript or listen to the story here.